2001 Dodge Viper Some lights, accessories, window, won't wo

I accidently charged the battery on quick start mode. After reading the owners manual it says never do this. Now my windows, turn signals, radio, and other accessories won't work. I have removed the battery hoping that it would reset the computer but no change. Any suggestions or what I need to do to get this fixed? I will not take it back to the dealership due to personality problems in the past. Thanks, Cathy